[ccp4bb]: compare active sites

[Miriam Hirshberg <mh270@mole.bio.cam.ac.uk>]

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Dear Valerie,

 try ProFit

 http://www.biochem.ucl.ac.uk/~martin/

 by Andrew Martin

Miri


>Hello,
>
>I am looking for a program to compare active sites of enzymes that bind
>the same ligand but do not have the same fold. The program should
>propose alignments of the two substructures with aminoacids of similar
>chemical properties in equivalent positions.
>Any suggestion ?
>Thanks in advance,
>
>
>
>.... Valerie
>
>--------------------------------------------------------------------------
>
>Valerie Biou                         Institut de Biologie Structurale
>biou@ibs.fr                               41 rue Jules Horowitz
>                                                38027 Grenoble cedex 1
>                                                             France
>fax : (+33) (0)4 76 88 54 94     tel : (+33) (0)4 76 88 95 92
>

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Miriam (Miri) Hirshberg         e-mail: m.hirshberg@mole.bio.cam.ac.uk
Department of Biochemistry      Tel   : (+44) 01223 766018
University of Cambridge         Tel   : (+44) 01223 333600 (switch board)
80 Tennis Court Road            Fax   : (+44) 01223 766002
Cambridge CB2 1GA, UK
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