[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
Re: [ccp4bb]: Re: your mail
*** For details on how to be removed from this list visit the ***
*** CCP4 home page http://www.ccp4.ac.uk ***
You may also use XtalView to walk automatically through your protein and you can
choose from which terminal you want to start first-you can go for example from
the C-terminal backwards to the N-terminal and vice versa
Tassos
Quoting "Gerard \"DVD\" Kleywegt" <gerard@xray.bmc.uu.se>:
> *** For details on how to be removed from this list visit the ***
> *** CCP4 home page http://www.ccp4.ac.uk ***
>
> > I am wondering if there is way to automatically walk through a
> protein
> > structure from N-terminal to C-terminal, so to have a better sense of
>
> > chain trace than the ramp painting?
>
> isn't this what you do when you rebuild your protein ? you can use OOPS2
> to
> generate O macros to take you from one residue to the next; see the
> manual at
> http://xray.bmc.uu.se/usf/oops2_man.html
>
> --dvd
>
> ******************************************************************
> Gerard J. Kleywegt
> [Research Fellow of the Royal Swedish Academy of Sciences]
> Dept. of Cell & Molecular Biology University of Uppsala
> Biomedical Centre Box 596
> SE-751 24 Uppsala SWEDEN
>
> http://xray.bmc.uu.se/gerard/ mailto:gerard@xray.bmc.uu.se
> ******************************************************************
> The opinions in this message are fictional. Any similarity
> to actual opinions, living or dead, is purely coincidental.
> ******************************************************************
>
>
-------------------------------------------------------------------------
A.C.(Tassos) Papageorgiou, PhD phone: +358 2 333 8012 (office)
Senior Scientist fax: +358 2 333 8000
Turku Centre for Biotechnology E-mail: apapageo@btk.utu.fi
BioCity, Turku URL: http://www.btk.utu.fi/~apapageo
FIN-20521, Finland