Re: [ccp4bb]: xplor on DNA from NMR data

[Saxena Neetu <neetupbs@iitr.ernet.in>]

***  For details on how to be removed from this list visit the  ***
***          CCP4 home page http://www.ccp4.ac.uk         ***



Neetu Saxena,
Department of Biotechnology,
IIT-Roorkee,
Roorkee,
INDIA.

On Sat, 16 Mar 2002, Saxena Neetu wrote:

> ***  For details on how to be removed from this list visit the  ***
> ***          CCP4 home page http://www.ccp4.ac.uk         ***
> > Dear all,
> I am a postgraduate student from India.
> i am working on xplor(0.5) for dna modeling through nmr data. i am using
> sgi origin 2000.
>    My problem is that when i run the file gen_new.inp by giving a .pdb
> file of DNA and dna-rna-allatom.top and dna-rna-allatom.param as inputs,
> It makes only .mtf file as output and no .pdb file. It shows errors in
> output file as follows: CNSrefine> write coordinates
> output=&coordinate_outfile end
>  CWRITE: zero atoms specified. No file created.
>  CNSrefine> write structure output=&structure_outfile end
> %SELRPN-RECAll-ERR:Store empty
> >  SELRPN:  0 atoms have been selected out of 0
> >  SHOW: zero atoms selected
>                 I also don't have parallhdg.dna and topallhdg.dna used for
> producing hydrogens in my software.From where I can obtain them.
>  Thanks
>  
> Neetu Saxena
> Department of Biotechnology
> IIT-Roorkee
> Roorkee
> India
> 
>