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[ccp4bb]: CCP4 Patch Release 4.2.2: Now Available
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CCP4 4.2.2 Now Available
========================
The Daresbury ftp server has been updated to patch release 4.2.2:
ftp://ftp.ccp4.ac.uk/pub/ccp4/4.2.2/
Relative to 4.2.1, this release contains fixes to problems discovered in
4.2.1 and earlier, including those reported on the CCP4 Problems Pages
(see the list below, and the relevant section of the CHANGES file).
There is no significant new functionality, so if you have successfully
installed 4.2.* and none of the reported problems or changes are relevant
to you, then you may decide not to update.
For those who do, updates are available as:
1. A completely updated source code package (packed/ccp4-4.2.2.tar.gz),
and unpacked version (in the "unpacked" directory)
2. A global patch file (patches/ccp4-4.2.1-4.2.2.diff),
3. Updated binaries (in the "binaries" directory) for IRIX (n32-bit,
built under IRIX64 6.5), OSF1 (standard and "non-shared" versions,
built under Digital Unix V4.0), Linux (built under RedHat 7.3)
and SunOS (built under SunOS 5.8), Mac OS-X and Windows.
For information on installing from scratch, see the existing installation
document. For information on upgrading an existing 4.2 or 4.2.2
installation using the patch and/or binaries, see the updated installation
document ftp://ftp.ccp4.ac.uk/pub/ccp4/4.2.2/unpacked/INSTALL.html.
Many thanks to those people who have reported problems and provided fixes.
Thanks also to Alun Ashton and Charles Ballard for providing respectively
the Windows and Mac OS-X binary installations.
Summary of fixes in 4.2.2
=========================
* Building etc.:
* Fixed problem with configure not detecting existing LAPACK and/or
BLAS libraries from earlier CCP4i installation.
* Program changes:
* CIF2MTZ: fixed broken LABOUT keyword.
* COMBAT: fixed bug with processing XDET, YDET and ROT values.
* IPDISP: fixed problem with failure of script under Tru64.
* MOLREP: fixed broken RAD keyword.
* PEAKMAX: fixed problem with misaligned atom name for OUTPUT PDB.
* PROFESSS: fixed broken TIDY keyword.
* SCALA: version 3.1.20
* SFTOOLS: fixed bug which failed to convert CNS Rfree to MTZ if the
file contains reflections with zero sigma.
* SIGMAA: fixed problem with PARTIAL DAMP weights not being applied
when keyword DAMP is in lower case.
* Library changes:
* MTZLIB: fixed problem with uninitialized variable in s/r LRASSN
(caused runtime errors associated with label assignments on some
systems).
* Graphical User Interface:
* Version 1.3.9.
* General: database.def is validated when changing projects.
* General: database.LOCK is only removed by the process that "owns" it.
* General: fixed problem with files missing from the "View Files from
Job" list, for some long-running jobs (e.g. ARP/wARP).
* General: fixed anomalous behaviour when closing task windows
(introduced accidentally in 1.3.8).
* Beast task: fixed problem with parameters being changed when trying
to rerun earlier Beast jobs.
* DMMulti task: fixed problem with running multiple domain jobs.
* FFT task: fixed broken facility excluding sf's below a certain
amplitude.
* Molrep task: fixed broken option to input fixed monomers.
* Monomer Library Sketcher: fixed problems with output for aromatic
bonds, and with mixed cases for atom names.
* PrepHAData task: fixed broken option using "SAD data as Dano" and
outputing SHELX format.
* SigmaA task: fixed broken options "combine isomorphous phase with
partial solution" and "combine two sets of MIR phases".
As always: please check the CCP4 Problems Pages
(http://www.ccp4.ac.uk/problems.html), and report any new bugs/fixes to
ccp4@ccp4.ac.uk.
--
_____________________________________________________
Peter J Briggs, pjx@ccp4.ac.uk Tel: +44 1925 603826
CCP4, ccp4@ccp4.ac.uk Fax: +44 1925 603825
http://www.ccp4.ac.uk/
Daresbury Laboratory, Daresbury, Warrington WA4 4AD