[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [ccp4bb]: auto amore and scripts



***  For details on how to be removed from this list visit the  ***
***          CCP4 home page http://www.ccp4.ac.uk         ***



S. Thiyagarajan wrote:
> dear ccp4 users
> 
> I found a great difference in running AMoRe through GUI and the same 
> using the scripts. there was a difference of 10% in the R-factor in the 
> final refine fitting outputs of the two runs.
> 
> has anybody come across such a thing. I ve checked the other parameters 
> for any differences
> 
> bye
> 
> Thiyagarajan
> 
>

   This should be impossible IF the GUI and the scripts use the same 
parameters; eg, resolution limits, search sphere radius etc etc..

  Obv if these are different the results will be different..

    Or have I misundrstood something?

  Eleanor




> 
> ===================================================
> == S. Thiyagarajan ==
> == Research Scholar ==
> == Department of Crystallography and Biophysics ==
> == University of Madras, Guindy Campus ==
> == Chennai - 600 025. India ==
> ===================================================
> 
> 
> ------------------------------------------------------------------------
> Do you Yahoo!?
> Yahoo! Web Hosting <http://webhosting.yahoo.com/ps/wh3/prod/> - 
> establish your business online