Re: [ccp4bb]: Protein alignment/secondary structure

[Preben Morth <premo@imsb.au.dk>]

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Hi Ding

try this webpage

http://www.biochem.ucl.ac.uk/bsm/pdbsum/

regards Preben


On Tue, 13 Nov 2001, Ditlev Brodersen wrote:

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> 
>   I am looking for a program to automatically draw secondary structure
> above a linear protein sequence (or alignment) and output this as
> postscript. Ideally this should be using the secondary structure as
> defined in the PDB file, rather than calculated using H-bonds. 
> 
>   Has anybody heard of something like this?
> 
> Thanks,
> 
>   Ditlev
> 
> ---------------------------------------------------------------------------------
> Ditlev Brodersen, Ph.D                 Phone: +44 (0) 1223 252945
> Post-doctoral fellow                   Fax:   +44 (0) 1223 213556
> MRC Laboratory of Molecular Biology    Email: ding@mrc-lmb.cam.ac.uk
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