[ccp4bb]: RE: Secondary structure diagram

["Ditlev Brodersen" <ding@mrc-lmb.cam.ac.uk>]

***  For details on how to be removed from this list visit the  ***
***          CCP4 home page http://www.ccp4.ac.uk         ***

Hi there,

> Is there a program to take a pdb file to generate a plot of the
> protein sequence and secondary structure identified within it?

  I had exactly the same problem a few weeks ago and decided to sit down and
write a little program to take care of this. If you (or anybody else) is 
interested, have a look at 

  http://alf1.mrc-lmb.cam.ac.uk/~ding/secseq

Best wishes,

  Ditlev

---

Dr. Ditlev E. Brodersen, Ph.D.
Postdoctoral fellow

Medical Research Council          Phone:  +44 (0) 1223 252945
Laboratory of Molecular Biology   Mobile: +44 (0) 7866 563050
Hills Road                        Fax:    +44 (0) 1223 213556
Cambridge CB2 2QH                 Email:  ding@mrc-lmb.cam.ac.uk
United Kingdom                    WWW:    http://alf1.mrc-lmb.cam.ac.uk/~ding