Re: [ccp4bb]: PROTEIN CONTACTS

["Paula Regina Kuser Falcão" <paula@cbi.cnptia.embrapa.br>]

***  For details on how to be removed from this list visit the  ***
***          CCP4 home page http://www.ccp4.ac.uk         ***

Dear Pedro,

      You can have a full and detailed report of contacts between molecules using
      the Contacts module from SMS at http://www.cbi.cnptia.embrapa.br/
      You will find a pointer to Contacts on the left side of the page.

      We also have a mirror in the USA: http://trantor.bioc.columbia.edu/SMS/


      Regards,

      Paula Kuser


> ***  For details on how to be removed from this list visit the  ***
> ***          CCP4 home page http://www.ccp4.ac.uk         ***
> 
> 
> 
> Hi all,
> I am interested in listing the protein contacts between  molecules,
> chains, side-chains etc for whole set of structures, and I wonder if
> someone could suggest me a good  UNIX program preferably working on the
> command line to to the job. If the program could also identify the type
> of contacts (VW, H-bonds, salt bridges) will be great.
> Thanks for consideration,
> 
> 
> 
> Pedro
> 
> --
> *******************************************************************
> PEDRO A. RECHE , pHD            TL: 617 632 3824
> Dana-Farber Cancer Institute,   FX: 617 632 4569
> Harvard Medical School,         EM: reche@research.dfci.harvard.edu
> 44 Binney Street, D1510A,       EM: reche@mifoundation.org
> Boston, MA 02115                URL: http://www.reche.org
> *******************************************************************
> 
> 
> 
> 

Paula Kuser
Centro de BioInformática Estrutural
Embrapa Informática Agropecuária
Telefone: (19) 3789 5830
Av. Dr. André Tosello, s/n, Campinas, SP
Caixa Postal 6041
Cidade Universitária "Zeferino Vaz"
CEP 13083-970 Campinas (SP) - Brasil