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Re: [ccp4bb]: Atom Position restraints in refmac



My question is: how do I constrain the distance more forcefully?


Another question though is: SHOULD you constrain the distance ?
(You can't do it more forcefully, constraints are like pregnancy
and homology: Either you are pregnant or not, either you are
homologous or not. You can't be 'a bit pregnant' or '20% homologous'.
In contrast you can have 'more forceful REstraints' or '20% similarity'.)

Back to crystallography: if these distances are the only ones that deviate
while the rest of the structure geometry follows stereochemical expectations
shouldn't you worry of what else might be there rather than trying to 'force' it
to what you think that there is there ?


Tassos

PS Sorry guys, Greek for 'Sulphur' is 'Thio'.

Is there an alternative method?

 

Thanks
Abhinav

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Abhinav Kumar, Ph. D.
Plexxikon, Inc.
91 Bolivar Dr.Suite A       Tel: 510.647.4021
Berkeley,CA-  94710      Fax: 510.548.4785
akumar@plexxikon.com
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