, including all inherited members.
atom_list() const | clipper::MMonomer | |
copy(const MMonomer &other, const MM::COPY &mode) | clipper::MMonomer | |
clipper::PropertyManager::copy(const PropertyManager &mgr) | clipper::PropertyManager | |
Default enum value (defined in clipper::MMonomer) | clipper::MMonomer | |
default_type() (defined in clipper::MMonomer) | clipper::MMonomer | [inline, static] |
delete_property(const std::string &label) | clipper::PropertyManager | |
Dunbrack enum value (defined in clipper::MMonomer) | clipper::MMonomer | |
exists_property(const std::string &label) const | clipper::PropertyManager | |
find(const String &n, const MM::MODE mode=MM::UNIQUE) const | clipper::MMonomer | |
find(const String &n, const MM::MODE mode=MM::UNIQUE) | clipper::MMonomer | |
get_property(const std::string &label) const | clipper::PropertyManager | |
id() const | clipper::MMonomer | [inline] |
id_match(const String &id1, const String &id2, const MM::MODE &mode) | clipper::MMonomer | [static] |
id_tidy(const String &id) | clipper::MMonomer | [static] |
insert(const MAtom &add, int pos=-1) | clipper::MMonomer | |
lookup(const String &str, const MM::MODE &mode) const | clipper::MMonomer | |
operator&(const MMonomer &m1, const MMonomer &m2) | clipper::MMonomer | [friend] |
operator=(const PropertyManager &mgr) | clipper::PropertyManager | |
operator[](const int &i) const | clipper::MMonomer | [inline] |
operator[](const int &i) | clipper::MMonomer | [inline] |
operator|(const MMonomer &m1, const MMonomer &m2) | clipper::MMonomer | [friend] |
PropertyManager() | clipper::PropertyManager | |
PropertyManager(const PropertyManager &mgr) | clipper::PropertyManager | |
protein_mainchain_build_carbonyl_oxygen(const MMonomer &next) | clipper::MMonomer | |
protein_peptide_bond(const MMonomer &m1, const MMonomer &m2, ftype r=1.5) | clipper::MMonomer | [static] |
protein_ramachandran_phi(const MMonomer &m1, const MMonomer &m2) | clipper::MMonomer | [static] |
protein_ramachandran_psi(const MMonomer &m1, const MMonomer &m2) | clipper::MMonomer | [static] |
protein_sidechain_build_rotamer(const int &n, TYPE t=default_type_) | clipper::MMonomer | |
protein_sidechain_build_rotomer(const int &n) (defined in clipper::MMonomer) | clipper::MMonomer | [inline] |
protein_sidechain_number_of_rotamers(TYPE t=default_type_) const | clipper::MMonomer | |
protein_sidechain_number_of_rotomers() const (defined in clipper::MMonomer) | clipper::MMonomer | [inline] |
Richardson enum value (defined in clipper::MMonomer) | clipper::MMonomer | |
select(const String &sel, const MM::MODE mode=MM::UNIQUE) const | clipper::MMonomer | |
seqnum() const | clipper::MMonomer | [inline] |
set_id(const String &s) | clipper::MMonomer | |
set_property(const std::string &label, const Property_base &property) | clipper::PropertyManager | |
set_seqnum(const int s, const String inscode="") | clipper::MMonomer | |
set_type(const String &s) | clipper::MMonomer | |
size() const | clipper::MMonomer | [inline] |
transform(const RTop_orth rt) | clipper::MMonomer | |
TYPE enum name | clipper::MMonomer | |
type() const | clipper::MMonomer | [inline] |
~PropertyManager() | clipper::PropertyManager | |