clipper::MSequenceAlign Class Reference

Sequence alignment obeject. More...

#include <minimol_seq.h>

List of all members.

Public Types
enum	TYPE { GLOBAL, LOCAL }
Public Member Functions
	MSequenceAlign (TYPE type=GLOBAL, ftype match_score=1.0, ftype miss_score=-0.5, ftype gap_score=-1.0)
std::pair< std::vector< int > , std::vector< int > >	operator() (const String &seq1, const String &seq2) const

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Detailed Description

Sequence alignment obeject.

Provides methods to find an optimal alignment between two sequences.

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The documentation for this class was generated from the following files:

• minimol_seq.h
• minimol_seq.cpp