Re: [ccp4bb]: ccp4i / tcl errors

[Liz Potterton <lizp@ysbl.york.ac.uk>]

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Hello CCP4BB,

The immediate solution is to edit the refmac log file to correct the
table format from

 $TABLE: Rfactor analysis, F distribution v resln  :
$GRAPHS:<Rfactor> v. resln :N:1,6,7:
:<Fobs> and <Fc> v. resln :N:1,4,5:
:% observed v. resln :N:1,3:
$$
M(4SSQ/LL) NR_used %_obs M(Fo_used) M(Fc_used) Rf_used WR_used
$$
 0.005      52  91.23   157.0   134.9  0.34  0.37
 0.015      78  95.12   159.5   149.6  0.35 

to

$TABLE: Rfactor analysis, F distribution v resln  :
$GRAPHS:<Rfactor> v. resln :N:1,6,7:
:<Fobs> and <Fc> v. resln :N:1,4,5:
:% observed v. resln :N:1,3:
$$
M(4SSQ/LL) NR_used %_obs M(Fo_used) M(Fc_used) Rf_used WR_used
$$
M(4SSQ/LL) NR_used %_obs M(Fo_used) M(Fc_used) Rf_used WR_used
$$
 0.005      52  91.23   157.0   134.9  0.34  0.37
 0.015      78  95.12   159.5   149.6  0.35 

That is just duplicate the column header line and add a the double $$. 
Unfortunately you need to do this for every table that you want to view.

Liz

David R. Cooper wrote:
> 
> ***  For details on how to be removed from this list visit the  ***
> ***    CCP4 home page http://www.dl.ac.uk/CCP/CCP4/main.html    ***
> 
> Hello, everyone.
> 
> I have recently installed CCP4-4.1 on a RedHat 6.2 machine.  Everything
> seems to be fine, except when I try to view some of the graphs.
> For example, when I try to look at the Refmac tables of "Rfactor analysis,
> F distribution v resin" I get the error
> "Error:can't find element "Rf_used" in ".f.pane.p1.g"
> The stack trace is below.
> The same error arises in the rmstab graph, except it is the element
> "main-chain" that is not found.  The same stack trace is produced.
> These errors are only produced when I try to view graphs produced by the
> latest version of CCP4.
> 
> Any suggestions?  Has anyone else seen this?
> 
> Thanks,
> David Cooper
> 
> ps Here is stack trace.
> can't find element "main-chain" in ".f.pane.p1.g"
>     while executing
> "$g element configure $name -color $colour -symbol
> $symbol -pixels $symbolsize -linewidth $linewidth
> -dashes $dashes"
>     (procedure "configure_plot" line 32)
>     invoked from within
> "configure_plot stuff"
>     (procedure "plot_data" line 111)
>     invoked from within
> "plot_data $arrayname $dataVar $ig"
>     (procedure "plot_data0" line 12)
>     invoked from within
> "plot_data0 stuff data 0"
>     (procedure "expand_table_list" line 13)
>     invoked from within
> "expand_table_list stuff data [.f.pane.p2.pl.lb
> nearest 14]"
>     (command bound to event)