[ccp4bb]: Deposition of EM data with fitted coordinates to the PDB

[Kim Henrick <henrick@ebi.ac.uk>]

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 ***  Announcement of Deposition of EM data 
      with fitted coordinates to the PDB ***


CRYO-ELECTRON MICROSCOPY methods that generate fitted coordinates
can now be deposited to the PDB into a new template.
(see http://iims.ebi.ac.uk/3dem_pdb.html
 or  http://deposit.rcsb.org/cryo-em.html).

New versions of AutoDep  (http://autodep.ebi.ac.uk) and 
ADIT (http://pdb.rutgers.edu/adit/ and 
http://pdbdep.protein.osaka-u.ac.jp/adit/) 
are available designed to support this detailed template 
for Electron Microscopy.

AutoDep is also capable of supporting HARVEST information 
from CCP4 (SCALA, TRUNCATE,REFMAC) and the CNS program suite. 
The information from Harvest files can be merged, resulting in quicker
deposition. (Note: Full details of TLS and NCS refinement parameters
are not reflected back in the web pages as this level of detail
is not expected to be entered by hand.)
For further details see:
 http://autodep.ebi.ac.uk/autodep-doc/html/release-notes.html

The mapping of the PDB template to mmCIF definitions is given in
   http://iims.ebi.ac.uk/pdb-iimsCIF.html
and the additional mmcif definitions are given in
   http://iims.ebi.ac.uk/iims_dictionary/iims.dic
or http://iims.ebi.ac.uk/cif_iims.dic/Groups/em_group.html


 ( Apologies if you receive multiple copies of this 
   message from different bulletin boards )
 

Kim HENRICK    henrick@ebi.ac.uk ::telephone:  +44 (0) 1223 494629