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[ccp4bb]: p61 vs p65 flipped
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Ed writes:
>
>
> Also, can anybody out there tell me whether there are 4 different phasing
> possibilities: p61 with sites flipped or unflipped, and p65 flipped,
> unflipped. Or are 2 pairs of these equivalent? I made 4 maps using all 4
> possibilities and they seem to be different but I'm not sure that I've done
> everything correctly. For flipped maps I have simply made the Se positions
> negative in mlphare (i.e. Se site at 0.1 0.1 0.1 becomes -0.1 -0.1 -0.1),
> and made fft maps for all 4.
>
This is a common confusion: there are two solutions in all spacegroups.
The simplest way of thinking about it is consider the whole unit cell,
not just the asymmetric unit
Suppose you have one site/asu, 6 sites/cell. One solution has a site
at x,y,z + all the symmetry relatives in P6(1). The alternative which
also fits the Patterson inverts all 6 sites in the cell to -x,-y,-z.
This inversion automatically changes the 6(1) axis to a 6(5) thus
changing the spacegroup.
Phil