Clipper
map_utils.h
00001 
00004 //C Copyright (C) 2000-2006 Kevin Cowtan and University of York
00005 //L
00006 //L  This library is free software and is distributed under the terms
00007 //L  and conditions of version 2.1 of the GNU Lesser General Public
00008 //L  Licence (LGPL) with the following additional clause:
00009 //L
00010 //L     `You may also combine or link a "work that uses the Library" to
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00012 //L     that work under terms of your choice, provided that you give
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00014 //L     version of the Library is used in it, and that you include or
00015 //L     provide public access to the complete corresponding
00016 //L     machine-readable source code for the Library including whatever
00017 //L     changes were used in the work. (i.e. If you make changes to the
00018 //L     Library you must distribute those, but you do not need to
00019 //L     distribute source or object code to those portions of the work
00020 //L     not covered by this licence.)'
00021 //L
00022 //L  Note that this clause grants an additional right and does not impose
00023 //L  any additional restriction, and so does not affect compatibility
00024 //L  with the GNU General Public Licence (GPL). If you wish to negotiate
00025 //L  other terms, please contact the maintainer.
00026 //L
00027 //L  You can redistribute it and/or modify the library under the terms of
00028 //L  the GNU Lesser General Public License as published by the Free Software
00029 //L  Foundation; either version 2.1 of the License, or (at your option) any
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00032 //L  This library is distributed in the hope that it will be useful, but
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00040 //L  The GNU Lesser General Public can also be obtained by writing to the
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00043 
00044 
00045 #ifndef CLIPPER_MAP_UTILS
00046 #define CLIPPER_MAP_UTILS
00047 
00048 
00049 #include "derivs.h"
00050 
00051 
00052 namespace clipper
00053 {
00054 
00056 
00062   class Map_stats
00063   { 
00064   public:
00065     Map_stats() {}                                
00066     template<class M> Map_stats( const M& map );  
00067     const ftype& mean() const { return mean_; }        
00068     const ftype& std_dev() const { return std_dev_; }  
00069     const ftype& min() const { return min_; }          
00070     const ftype& max() const { return max_; }          
00071     const Range<> range() const { return Range<>( min_, max_ ); } 
00072   private:
00073     ftype mean_, std_dev_, min_, max_;
00074   };
00075 
00076 
00078 
00091   class Map_index_sort
00092   {
00093   public:
00095     template<class M> static void sort_increasing( const M& map, std::vector<int>& index );
00097     template<class M> static void sort_decreasing( const M& map, std::vector<int>& index );
00099   private:
00100     template<class M> class Compare_density {
00101     public:
00102       Compare_density( const M& m ) { p = &m; }
00103       bool operator() ( const int& i1, const int& i2 ) const { return p->get_data(i1) < p->get_data(i2); }
00104     private:
00105       const M* p;
00106     };
00107   };
00108 
00109 
00110   // template implementations
00111 
00114   template<class M> Map_stats::Map_stats( const M& map )
00115   {
00116     ftype64 w, x, s, sx, sxx;
00117     s = sx = sxx = 0.0;
00118     min_ =  1.0e12;
00119     max_ = -1.0e12;
00120     for ( typename M::Map_reference_index im = map.first();
00121           !im.last(); im.next() ) {
00122       w = 1.0 / ftype64( map.multiplicity( im.coord() ) );
00123       x = ftype64( map[im] );
00124       if ( !Util::is_nan(x) ) {
00125         s += w;
00126         sx += w*x;
00127         sxx += w*x*x;
00128         if ( x < min_ ) min_ = x;
00129         if ( x > max_ ) max_ = x;
00130       }
00131     }
00132     sx /= s;
00133     sxx /= s;
00134     mean_ = sx;
00135     std_dev_ = sqrt( sxx - sx*sx );
00136   }
00137 
00138 
00139 } // namespace clipper
00140 
00141 #endif