CCP4 Molecular Graphics Documentation
	Contents

Documentation Contents

General

• Graphics Window - mouse bindings and short cuts
• The Tools menu
• The View menu
• Projects - data organisation
• Installation of support programs
• Compiling CCP4MG

Molecular models

• Reading coordinate files and atom typing
• The Coordinate Model Interface
• Atom selection
• Structure Analysis
• Surfaces and Electrostatic Potentials
• Symmetry Related Models
• Animations
• PISA Analysis of Model Interfaces

Other types of data

• Electron density maps
• Vectors
• Text and imported images

Applications

• Superpose automatic protein superposition and interactive superposition of any structures
• Presentation Graphics
• Picture Wizard set up complex pictures quickly
• Movies
• Presentations
• Geometry
• Run Coot

Other utilities

• Lighting
• Saving the program status
• Picture Definition Files (also Object attributes and Introduction to Python)
• Making presentations

See Display Table for general overview of the display table. For information on specific type of data click the appropriate data type in the File list below.

Windows Bring a 'lost' window to the front.
Projects Edit projects or change projects.

These help pages are also available as PDF files:
.../ccp4mg/help/documentation.pdf
.../ccp4mg/help/tutorials.pdf

• http://www.ysbl.york.ac.uk/~ccp4mg/ccp4mg_help/index.html has the latest help pages which may have more information.